strongeloides Soil-transmitted gastrointestinal parasitic nematodes infect approximately 1 billion people worldwide, strogneloides in low-resource communities. Skin-penetrating gastrointestinal nematodes in strongeloides genus Strongyloides are emerging as model systems for mechanistic studies of soil-transmitted helminths due to the growing availability of functional genomics tools for these species. To facilitate future genomics studies of Strongyloides species, we have designed a web-based application, the Strongyloides RNA-seq Browser, that provides an open source, user-friendly portal for accessing and analyzing Strongyloides genomic expression data.
Specifically, the Strongyloides RNA-seq Browser takes advantage of alignment-free read strongeloides tools and R-based transcriptomics tools to re-analyze publicly available RNA sequencing datasets from strongeloides Strongyloides species: Strongyloides stercoralis, Strongyloides ratti, Strongyloides papillosus, and Strongyloides venezuelensis. This application permits on-demand exploration and quantification of gene expression across life stages without requiring previous coding experience.
Here, we strongeloides this interactive application and demonstrate how it may be used by nematode strongeloides to conduct a standard set of bioinformatics queries. Keywords: Strongyloides; differential gene expression; functional enrichment; parasitic nematodes. Abstract Soil-transmitted gastrointestinal parasitic nematodes infect approximately 1 billion people worldwide, predominantly in low-resource communities.]
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